List of publications AME

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Total found: 617 records
Frková Z., Pistocchi C., Vystavna Y., Čapková K., Doležal J., Tamburini F. (2022) Phosphorus dynamics during early soil development in a cold desert: insights from oxygen isotopes in phosphate. Soil 8: 1–15.
DOI: 10.5194/soil-8-1-2022
Gubiani J.R., Bernardi D.I., Pires de Paula C., Seleghim M.H.R., Ferreira A.G., Batista A.N.L., Batista Jr. J.M., Oliveira L.F.P., Lira S.P., Burdette J.E., Berlinck R.G.S. (2022) Absolute configuration of cytotoxic anthraquinones from a Brazilian cave soil‐derived fungus, Aspergillus sp. SDC28. Archive der Pharmazie 355: e2100441.
DOI: 10.1002/ardp.202100441
Haber M., Rosenberg D.R., Lalzar M., Burgsdorf I., Saurav K., Lionheart R., Lehahn Y., Aharonovich D., Gómez-Consarnau L., Sher D., Krom M.D., Steindler L. (2022) Spatiotemporal variation of microbial communities in the ultra-oligotrophic Eastern Mediterranean Sea. Frontiers in Microbiology 13: 867694.
DOI: 10.3389/fmicb.2022.867694
Hejzlar J., Blabolil P., Čtvrtlíková M., Jůza T., Kasalický V., Kubečka J., Seďa J., Znachor P. (2022) Účinnost biomanipulace pro řízení vodního ekosystému a kvality vody ve vodárenských nádržích? [Biomanipulation efficiency for the control of aquatic ecosystem and water quality in water supply reservoirs?] Proc. Conf. Water Supply Biology 2022 147-156.
Henriques Vieira H., Bagatini I.L., de Moraes G.P., Freitas R.M., Sarmento H., Bertilsson S., Vieira A.A.H. (2022) Regional factors as major drivers for microbial community turnover in tropical cascading reservoirs. Frontiers in Microbiology 13: 831716.
DOI: 10.3389/fmicb.2022.831716
Johnson M.S., Burns B.P., Herdean A., Angeloski A., Ralph P., Morris T., Kindler G., Wong H., Kuzhiumparambil U., Sedger L.M., Larkum A.W.D. (2022) A cyanobacteria enriched layer of Shark Bay stromatolites reveals a new Acaryochloris strain living in near infrared light. Microorganisms 10: 1035.
DOI: 10.3390/microorganisms10051035
Kajgrová L., Blabolil P., Drozd B., Roy K., Regenda J., Šorf M., Vrba J. (2022) Negative effects of undesirable fish on common carp production and overall structure and functioning of fishpond ecosystems. Aquaculture 549: 737811.
DOI: 10.1016/j.aquaculture.2021.737811
Kim B., Min B., Han J.-G., Park H., Baek S., Jeong S., Choi I.-G. (2022) Draft genome sequence of the reference strain of the korean medicinal mushroom Wolfiporia cocos KMCC03342. Mycobiology 50: 254-257.
DOI: 10.1080/12298093.2022.2109874
Kim H.W., Park B.H., Park H., Baek B.C., Choi I.G., Rhee M.S. (2022) Low-shear modeled microgravity affects metabolic networks of Escherichia coli O157:H7 EDL933: Further insights into space-microbiology consequences. Food Research International 154: 111013.
DOI: 10.1016/j.foodres.2022.111013
Kindler G.S., Wong H., Larkum A.W.D., Johnson M., MacLeod F.I., Burns B.P. (2022) Genome-resolved metagenomics provides insights into the functional complexity of microbial mats in Blue Holes, Shark Bay. FEMS Microbiology Ecology 98: fiab158.
DOI: 10.1093/femsec/fiab158
Marian I.M., Vonk P.J., Valdes I.D., Barry K., Bostock B., Carver A., Daum C., Lerner H., Lipzen A., Park H., Schuller M.B.P., Tegelaar M., Tritt A., Schmutz J., Grimwood J., Lugones L.G., Choi I.-G., Wösten H.A.B., Grigoriev I., Ohm R.A. (2022) The transcription factor Roc1 is a key regulator of cellulose degradation in the wood-decaying mushroom Schizophyllum commune. mBio 13: e0062822.
DOI: 10.1128/mbio.00628-22
Masuda T., Inomura K., Mareš J., Prášil O. (2022) Crocosphaera watsonii. Trends in Microbiology 30: 805-806.
DOI: 10.1016/j.tim.2022.02.006
Metz S., Huber P., Mateus-Barros E., Junger P.C., de Melo M., Bagatini I.L., Izaguirre I., dos Reis M.C., Llames M.E., Accattatis V., Quiroga M.V., Devercelli M., Schiaffino M.R., Niño-García J.P., Navarro M.B., Modenutti B., Vieira H., Saraceno M., Sabio y García C.A., Pereira E., González-Revello A., Piccini C., Unrein F., Alonso C., Sarmento H. (2022) A georeferenced rRNA amplicon database of aquatic microbiomes from South America. Scientific Data 9: 565.
DOI: 10.1038/s41597-022-01665-z
Nobs S.J., MacLeod F.I., Wong H., Burns B.P. (2022) Eukarya the chimera: eukaryotes, a secondary innovation of the two domains of life? Trends in Microbiology 30: 421-431.
DOI: 10.1016/j.tim.2021.11.003
Oren A., Mareš J., Rippka R. (2022) Validation of the names Cyanobacterium and Cyanobacterium stanieri, and proposal of Cyanobacteriota phyl. nov. International Journal of Systematic and Evolutionary Microbiology 72: 005528.
DOI: 10.1099/ijsem.0.005528
Petruželová J., Bojková J., Sychra J., Šorfová V., Polášková V., Vrba J. (2022) Complex effects of acidification, habitat properties and fish stock on littoral macroinvertebrate assemblages in montane standing waters. Journal of Limnology 81: 2053.
DOI: 10.4081/jlimnol.2022.2053
Pires de Paula C. (2022) Diversity of cave microbiomes. In: Cave fauna of Brazil 104 - 129.
DOI: ISBN: 978-65-87674-05-6
Pires de Paula C., Macek P., Bárta J., Borovec J., Svobodová I., Holá E., Lepš J., Sirová D. (2022) Parasitic trophic mode of plant host affects the extent of colonization, but does not induce systematic shifts in the composition of foliar endophytic assemblages in temperate meadow ecosystems. Functional Ecology 36: 1177–1190.
DOI: 10.1111/1365-2435.13992
Prokopchuk G., Korytář T., Juricová V., Horák A., Majstorović J., Šimek K., Lukeš J. (2022) Trophic flexibility of marine diplonemids - switching from osmotrophy to bacterivory The ISME Journal 16: 1409–1419.
DOI: 10.1038/s41396-022-01192-0

Documents to download:
Prokopchuk_2022_ISMEJ (pdf)
Ray A.E., Zaugg J., Benaud N., Chelliah D.S., Bay S., Wong H., Leung P.M., Ji M., Terauds A., Montgomery K., Greening C., Cowan D.A., Kong W., Williams T.J., Hugenholtz P., Ferrari B.C. (2022) Atmospheric chemosynthesis is phylogenetically and geographically widespread and contributes significantly to carbon fixation throughout cold deserts. ISME Journal 16: 2547–2560.
DOI: 10.1038/s41396-022-01298-5
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